Harman Patil (Editor)

Spinal Cord Toolbox

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Developer(s)
  
NeuroPoly

Operating system
  
Linux, Mac OS X

Written in
  
Python

Size
  
140MB

Stable release
  
2.2.3 / 4 February 2016; 13 months ago (2016-02-04)

Preview release
  
3.0 beta27 / 23 October 2016; 4 months ago (2016-10-23)

The Spinal Cord Toolbox (SCT) is a suite of analysis tools optimized for spinal cord images acquired with magnetic resonance imaging. Main features include segmentation, registration and calculation of anatomical metrics.

Main Features

  • Propseg Automatic spinal cord segmentation.
  • The MNI-Poly-AMU template is an anatomical template of the spinal cord with T2 weighting including segmentation of white matter, gray matter, CSF. The template also include segmentation of spinal levels for automatic assessment of metrics at specific locations.
  • A White Matter atlas including 29 partial volume masks of which matter tracts.

    • References

    Spinal Cord Toolbox Wikipedia
    (Text) CC BY-SA