Samiksha Jaiswal (Editor)

Plant defensin

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Symbol
  
Gamma-thionin

Pfam clan
  
CL0054

PROSITE
  
PDOC00725

Pfam
  
PF00304

InterPro
  
IPR008176

SCOP
  
1gps

Plant defensin

Plant defensins (Formerly gamma-thionins) are a family of small, cysteine-rich proteins found in plants that serve to defend them against parasites.

Contents

The following plant proteins belong to this family:

  • The flower-specific Nicotiana alata defensin (NaD1)
  • Gamma-thionins from Triticum aestivum (Wheat) endosperm (gamma-purothionins) and gamma-hordothionins from Hordeum vulgare(Barley) are toxic to animal cells and inhibit protein synthesis in cell free systems.
  • A flower-specific thionin (FST) from Nicotiana tabacum (Common Tobacco).
  • Antifungal proteins (AFP) from the seeds of Brassicaceae species such as radish, mustard, turnip and Arabidopsis thaliana (Thale Cress).
  • Inhibitors of insect alpha-amylases from sorghum.
  • Probable protease inhibitor P322 from Solanum tuberosum (Potato).
  • A germination-related protein from Vigna unguiculata (Cowpea).
  • Anther-specific protein SF18 from sunflower. SF18 is a protein that contains a gamma-thionin domain at its N-terminus and a proline-rich C-terminal domain.
  • Glycine max (Soybean) sulfur-rich protein SE60.
  • Vicia faba (Broad bean) antibacterial peptides fabatin-1 and -2.
  • In their mature form, these proteins generally consist of about 45 to 50 amino-acid residues. As shown in the following schematic representation, these peptides contain eight conserved cysteines involved in disulfide bonds.

    +-------------------------------------------+ | +-------------------+ | | | | | xxCxxxxxxxxxxCxxxxxCxxxCxxxxxxxxxCxxxxxxCxCxxxC | | | | +---|----------------+ | +------------------+

    'C': conserved cysteine involved in a disulfide bond.

    The folded structure of Gamma-purothionin is characterised by a well-defined 3-stranded anti-parallel beta-sheet and a short alpha-helix. Three disulfide bridges are located in the hydrophobic core between the helix and sheet, forming a cysteine-stabilised alpha-helical motif. This structure differs from that of the plant alpha- and beta-thionins, but is analogous to scorpion toxins and insect defensins.

    Databases

    A database for antimicrobial peptides, including defensins is available: PhytAMP (http://phytamp.pfba-lab-tun.org).

    Subfamilies

  • Gamma Purothionin InterPro: IPR008177
  • This article incorporates text from the public domain Pfam and InterPro IPR008176

    References

    Plant defensin Wikipedia


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