Puneet Varma (Editor)

Haplogroup O P31

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Ancestor
  
O-M175

Defining mutations
  
P31, M268

In human genetics, Haplogroup O-P31 is a Y-chromosome DNA haplogroup. Haplogroup O-P31 is a descendant branch of the greater Haplogroup O-M175.

Contents

Origin

In a paper published in 2011 by a group of Chinese researchers affiliated with Fudan University, it has been suggested that China is the origin of the expansion of haplogroup O-P31 (therein called Haplogroup O2-M268).

Distribution

Haplogroup O-P31 is notable for the peculiarities of its geographical distribution. Like all clades of Haplogroup O-M175, Haplogroup O-P31 is found only among the males of modern Eastern Eurasian populations. However, Haplogroup O-P31 is generally found with high frequency only among certain populations, such as the Austroasiatic peoples of India, Bangladesh and Southeast Asia, the Nicobarese of the Nicobar Islands in the Indian Ocean, Koreans, and Japanese.

Besides its widespread and patchy distribution, Haplogroup O-P31 is also notable for the fact that it can be divided into two major subclades that show almost completely disjunct distribution. One of these subclades, Haplogroup O-M95, is found among some (mostly tribal) populations of South and Southeast Asia, as well as among the Khmers of Cambodia and the Balinese of Indonesia. The other major subclade, Haplogroup O-M176, is found almost exclusively among the Japanese, Koreans, and some Manchurians.

Phylogenetic History

Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome Phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.

Original Research Publications

The following research teams per their publications were represented in the creation of the YCC Tree.

Phylogenetic Trees

This phylogenetic tree of haplogroup O subclades is based on the YCC 2008 tree (Karafet 2008) and subsequent published research.

  • O-P31 (P31, M268)
  • O-K18
  • O-CTS10887
  • O-PK4
  • O-F838
  • O-M95 (M95)
  • O-M88 (M88, M111)
  • O-P49 (SRY465, P49, 022454)
  • O-CTS9259
  • O-CTS562
  • O-K10
  • O-K27
  • O-K4
  • O-K3
  • O-L682 Found in approximately 19% of South Korean males and with lower frequency in Japan and China
  • O-47z (47z) Found in approximately 24% of Japanese males and with lower frequency in Korea
  • References

    Haplogroup O-P31 Wikipedia


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