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Fisher transformation

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Fisher transformation

In statistics, hypotheses about the value of the population correlation coefficient ρ between variables X and Y can be tested using the Fisher transformation (aka Fisher z-transformation) applied to the sample correlation coefficient.

Contents

Definition

Given a set of N bivariate sample pairs (XiYi), i = 1, ..., N, the sample correlation coefficient r is given by

r = cov ( X , Y ) σ X σ Y = i = 1 N ( X i X ¯ ) ( Y i Y ¯ ) i = 1 N ( X i X ¯ ) 2 i = 1 N ( Y i Y ¯ ) 2 .

Here cov ( X , Y ) stands for the covariance between the variables X and Y and σ stands for the standard deviation of the respective variable. Fisher's z-transformation of r is defined as

z := 1 2 ln ( 1 + r 1 r ) = arctanh ( r ) ,

where "ln" is the natural logarithm function and "arctanh" is the inverse hyperbolic tangent function.

If (XY) has a bivariate normal distribution with correlation ρ and the pairs (XiYi) are independent and identically distributed, then z is approximately normally distributed with mean

1 2 ln ( 1 + ρ 1 ρ ) ,

and standard error

1 N 3 ,

where N is the sample size, and ρ is the true correlation coefficient.

This transformation, and its inverse

r = exp ( 2 z ) 1 exp ( 2 z ) + 1 = tanh ( z ) ,

can be used to construct a large-sample confidence interval for r using standard normal theory and derivations.

Discussion

The Fisher transformation is an approximate variance-stabilizing transformation for r when X and Y follow a bivariate normal distribution. This means that the variance of z is approximately constant for all values of the population correlation coefficient ρ. Without the Fisher transformation, the variance of r grows smaller as |ρ| gets closer to 1. Since the Fisher transformation is approximately the identity function when |r| < 1/2, it is sometimes useful to remember that the variance of r is well approximated by 1/N as long as |ρ| is not too large and N is not too small. This is related to the fact that the asymptotic variance of r is 1 for bivariate normal data.

The behavior of this transform has been extensively studied since Fisher introduced it in 1915. Fisher himself found the exact distribution of z for data from a bivariate normal distribution in 1921; Gayen in 1951 determined the exact distribution of z for data from a bivariate Type A Edgeworth distribution. Hotelling in 1953 calculated the Taylor series expressions for the moments of z and several related statistics and Hawkins in 1989 discovered the asymptotic distribution of z for data from a distribution with bounded fourth moments.

Other uses

While the Fisher transformation is mainly associated with the Pearson product-moment correlation coefficient for bivariate normal observations, it can also be applied to Spearman's rank correlation coefficient in more general cases. A similar result for the asymptotic distribution applies, but with a minor adjustment factor: see the latter article for details.

References

Fisher transformation Wikipedia