This is a list of scheduled and charter destinations served by Greek airline Ellinair.
As of October 2016, Ellinair flies internally within Greece, and to international destinations in Georgia, Germany, Hungary, Italy, Kazakhstan, Latvia, Serbia, Romania, Russia and Ukraine.
Köln||Germany||align=center|CGN||align=center|EDDK||style="background:#ffff80;"|Cologne Bonn Airport| (resumes 8 April 2017)
Greece
Kithira – Kithira Island National Airport
Germany
Leipzig – Leipzig/Halle Airport
Italy
Milan – Milan–Malpensa Airport
Verona – Verona Villafranca Airport
Russia
Astrakhan – Narimanovo Airport
Kaliningrad – Khrabrovo Airport
Moscow – Domodedovo International Airport
Turkey
Izmir – Adnan Menderes Airport
Ukraine
Donetsk - Donetsk International Airport
Estonia
Tallinn – Tallinn Airport Seasonal
Cyprus
Larnaca – Larnaca International Airport Seasonal
Greece
Zakynthos – Zakynthos International Airport Seasonal
Latvia
Riga – Riga International Airport Seasonal
Russia
Kazan – Kazan International Airport Seasonal
Nizhny Novgorod –Nizhny Novgorod International Airport Seasonal
Omsk – Omsk Tsentralny Airport Seasonal
Perm – Perm International Airport Seasonal
Ufa – Ufa International Airport Seasonal
Samara – Kurumoch International Airport Seasonal
Tyumen – Roshchino International Airport Seasonal
Volgograd – Volgograd International Airport Seasonal
Voronezh – Voronezh International Airport Seasonal
Kazakhstan
Almaty – Almaty International Airport Seasonal
Astana – Astana International Airport Seasonal
Ukraine
Lviv – Lviv Danylo Halytskyi International Airport Seasonal