The Winnebago Presbytery is a district governing body of the Presbyterian Church (USA) (or PCUSA). It consists of congregations located primarily in North Central and Northeastern Wisconsin. The Winnebago Presbytery consists of 33 congregations:
Bethesda Presbyterian Church, Pickett
Covenant Community Presbyterian Church, Schofield
First Presbyterian Church, Abbotsford
First Presbyterian Church, Arpin
First Presbyterian Church, Athelstane
First Presbyterian Church, Fond du Lac
First Presbyterian Church, Green Bay
First Presbyterian Church, Kiel
First Presbyterian Church, Manitowoc
First Presbyterian Church, Marshfield
First Presbyterian Church, Merrill
First Presbyterian Church, Neenah
First Presbyterian Church, Oconto
First Presbyterian Church, Omro
First Presbyterian Church, Oshkosh
First Presbyterian Church, Shawano
First Presbyterian Church, Sheboygan
First Presbyterian Church, Wausau
First Presbyterian Church, Wausaukee
First Presbyterian Church, Weyauwega
First Presbyterian Church, Winneconne
First United Presbyterian Church, DePere
First Presbyterian Church, Shawano
Forest Larger Parish Presbyterian Church, Laona/Lakewood/Wabeno
Frame Memorial Presbyterian Church, Stevens Point
Hope Presbyterian Church, White Lake
Melnik Presbyterian Church
Memorial Presbyterian Church, Appleton
Pioneer Presbyterian Church, Marinette
Riverside Presbyterian Church, Gleason
Robinsonville Presbyterian Church, New Franken
Wequiock Presbyterian Church, Green Bay
Wild Rose Presbyterian Church