Babenko is a surname. Notable people with the name include:
Dmitry Babenko (born 1985), Kazakhstani speed skaterAlexandr Babenko, ski-orienteering competitor from KazakhstanAleksei Babenko (born 1972), Russian footballerYuri Babenko (born 1978), Russian ice hockey playerSergei Babenko (born 1996), Russian football playerRuslan Babenko (born 1992), Ukrainian football midfielderDmytro Babenko (born 1978), Ukrainian footballerValery Babenko (born 1964), People's Deputy of Ukraine since November 2007