| 4–7 (3–5 PFL)|
Patrick St. Louis
| Rob Tenyer (4th year)|
| Pioneer Football League|
2016 Morehead State Eagles football team Wikipedia
The 2016 Morehead State Eagles football team represented Morehead State University in the 2016 NCAA Division I FCS football season. They were led by fourth-year head coach Rob Tenyer and played their home games at Jayne Stadium. They were members of the Pioneer Football League. They finished the season 4–7, 3–5 in PFL play to finish in a two-way tie for seventh place.